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Open Source Software - taverna  taverna

A collaborative workflow interface and enactor for bioinformatics

Open Source Software - simupop  simupop

A forward-time population genetics simulation environment

Open Source Software - genoviz  genoviz

GenoViz provides software applications and re-usable components for genomics data visualization. One included project is IGB: the Integrated Genome Br...

Open Source Software - gata  gata

GATA is a graphic alignment tool for comparative sequence analysis. It makes use of BLAST to graphically align two DNA sequences, creating box- line- ...

Open Source Software - orfer  orfer

ORFer reads the NCBI GenBank XML sequence format and extracts open reading frames for proteins. Sequences can be requested by GI or accession number. ...

Open Source Software - protomol  protomol

ProtoMol is an object-oriented component based framework for molecular dynamics simulations.

Open Source Software - avianfs  avianfs

Avian Freeware Suite (AFS) provides two things: Developers with libraries for Java Swing Widgets, XML handling, Fortran95 and Pascal; End users (Medic...

Open Source Software - hysss  hysss

Hy3S uses advanced MPI parallelized hybrid stochastic simulation methods to quickly compute the dynamics of biochemical networks with thousands of spe...

Open Source Software - protege-owl  protege-owl

** IMPORTANT NOTICE ** 10 Feb 2006 Code is being moved to the SMI subversion repository (http://smi-protege.stanford.edu/svn/owl/trunk/) Project will ...

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