OStatic

Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database i...

JGAP is a genetic algorithms package written in Java. It is designed to require minimum effort to use out of the box , but is also designed to be hig...

Lush is an object-oriented Lisp interpreter/compiler with a seamless interface to C, a huge numerical library, a GUI toolkit, and bindings to GSL, S...

gfit creates interface between biological models and experimental data and provides tools for their analysis

** IMPORTANT NOTICE ** 10 Feb 2006 Code is being moved to the SMI subversion repository (http://smi-protege.stanford.edu/svn/owl/trunk/) Project will ...

A neuroscientific knowledge management system for the published literature

The Genomic Diversity and Phenotype Data Model (GDPDM) captures molecular and phenotypic diversity data. MySQL databases are used to implement the sch...

NeoBio is a Java class library of Computational Biology Algorithms. The current version consists mainly of pairwise sequence alignment algorithms such...

A freely available clone of the excellent molecular modelling program O from Alwyn Jones.

Java Framework for Evolutionary Computation. This project emphasizes 1) extensibility of the code; 2) the separation of generic (method) code and ap...