OStatic

An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).

Open Babel is a community-driven scientific project including both cross-platform programs and developer library designed to support molecular modelin...

APBS is a software package for the numerical solution of the Poisson-Boltzmann equation, a popular continuum model for describing electrostatic intera...

Esra is a 100% pure java library for the interactive analysis of molecular mechanics data. Mangles your data in your favorite scripting language.

The chemical-structures package contains 3D structures of molecules in CML format.

RasTop is a molecular graphics program intended for the visualisation of proteins, nucleic acids and small molecules based on the popular Rasmol soft...

ProbeMaker is a framework for design of sets of oligonucleotide probes. It allows the design of different types of probes made up of separate sequence...

JChemPaint is a Java program for drawing 2D chemical structures like those found in most chemistry textbooks. It is based on the Chemistry Development...

Java class libraries for structural biology development: includes protein format conversion tool, printf-based text formatting, Pred2ary secondary str...

gfit creates interface between biological models and experimental data and provides tools for their analysis