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staden

A fully developed set of DNA sequence assembly (Gap4), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows.

esra

Esra is a 100% pure java library for the interactive analysis of molecular mechanics data. Mangles your data in your favorite scripting language.

jaligner

JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local ...

pydstool

This is a sophisticated & integrated simulation and analysis environment for dynamical systems models of physical systems (ODEs, DAEs, maps, and h...

chem-file

The chemical-structures package contains 3D structures of molecules in CML format.

cellml

This project is a portal to freely available CellML related software and development of such software.

neurobox

NeuroBox is an .NET OOP Library to generate, propagate and train complex neuronal networks with technologies like backpropagation with weight decay, m...

cicc-grid

Source code for the Chemical Informatics and Cyberinfrastructure Collaboratory project.

gexpert

GeXpert is an expert system that can be used for genetics and metabolic pathway analysis. GeXpert can help Biotechnologists do their work faster, redu...

spina

SPINA is software for determining constant structure-parameters of endocrine feedback control systems from hormone levels obtained in vivo. The first ...

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