OStatic

The aim of the BioWeka project is to add bioinformatics functionalities such as e.g. alignments to the popular machine learning framework Weka.

Biogenesis simulates the processes involved in the evolution of unicellular organisms. It tries to be a didactic approximation to the ideas of mutatio...

The Pfaat protein family alignment annotation tool is a Java-based multiple sequence alignment editor and viewer designed for protein family analysis....

Esra is a 100% pure java library for the interactive analysis of molecular mechanics data. Mangles your data in your favorite scripting language.

Spectre for mass spectrometry. (Quantitiave) analysis of multiple ls-ms(ms) runs, using mzXML import of raw data. (working on mzDATA). Provides filter...

GenoViz provides software applications and re-usable components for genomics data visualization. One included project is IGB: the Integrated Genome Br...

The project is for developing libraries for visualizing biological sequence data on the web. The libraries are written in C and currently use a lang...

JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion ...

CueMol - Molecular Visualization Framework

JAligner is an open source Java implementation of the dynamic programming algorithm Smith-Waterman with Gotoh's improvement for biological local ...